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Bioinformatics Algorithm
studying a book “Bioinformatics Algorithm”
2024
- Sliding Window
- Baekjoon 3078
- Reversal Distance
- Voting Classifier (Machine Learning)
- Overview of Classification with Ensemble Learning (Machine Learning)
- Classification; Example Use of Decision Tree (Machine Learning)
- Paper Reading; Control of Protein Stability by Post-Translational Modifications
- Classification; Decision Tree (Machine Learning)
- Evaluation of Classification (Machine Learning)
- Sklearn-Preprocessing (Machine Learning)
- Paper Reading; Modular Enzyme Assembly for Enhanced Cascade Biocatalysis and Metabolic Flux
- Paper Reading; The Coming of Age of de novo Protein Design
- Paper Reading; Designed Proteins Assemble Antibodies into Modular Nanocages
- Paper Reading; Cell-Free Protein Synthesis from Genomically Recoded Bacteria Enables Multisite Incorporation of Noncanonical Amino Acids
- Paper Reading; Advancing Synthetic Biology through Cell-Free Protein Synthesis
- Cross-Validation (Machine Learning)
- Supervised Learning Basic Flow with sklearn (Machine Learning)
- Motzkin Numbers and RNA Secondary Structures
- Maximum Matchings and RNA Secondary Structures
- Catalan Numbers and RNA Secondary Structures
- Perfect Matchings and RNA Secondary Structures
- Numpy
- RNA Splicing
- Locating Restriction Sites
- Enumerating Gene Orders
- Calculating Protein Mass
- Genetic Transfer in Bacteria and Mapping
- Opening Reading Frames
- Baekjoon 3190
- Baekjoon 19644
- Microbes Metabolism
- Paper Reading; Investigating the Concept and Origin of Viruses
- Extra Microbiology Knowledge
- Inferring mRNA from Protein
- Non-Mendelian; Genetic Linkage
- Finding a Protein Motif
- Baekjoon 2493
- Independent Alleles
- Non-Mendelian; Epigenetic Inheritance
- Expression Tree and Disjoint Set
- Non-Mendelian; Maternal Effect and Extranuclear Inheritance
- Extensions of Mendelian Inheritance
- LCS Algorithm
- Finding a Shared Motif
- Overlap Graphs
- Baekjoon 2800
- Calculator by Stack
- Doubly and Circular Linked List
- Mathematical Period
- Matrix for Linear Recurrence Relation
- Baekjoon 7576
- Dijkstra Algorithm
- Mortal Fibonacci Rabbits
- Sieve of Eratosthenes
- Remainder
- Consensus and Profile
- Newton’s Method
- Finding a Motif in DNA
- Baekjoon 2261
- Cumulative Sum and Difference
- Pivot Table (pandas)
- Group (pandas)
- Two Dataframe Connection (pandas)
- Filtering (pandas)
- Changing Column (pandas)
- Function Mapping (pandas)
- Time Series (pandas)
- Translating RNA into Protein
- Normalization (pandas)
2023
- Mendel’s First Law
- Category (pandas)
- Counting Point Mutations
- Computing GC Content
- Conversion in Column (pandas)
- Missed Data (pandas)
- Duplicated Data (pandas)
- Visualization (pandas)
- Looking at Data (pandas)
- Arithmetic Operation (pandas)
- Index (pandas)
- Dataframe (pandas)
- Series (pandas)
- Transcribing DNA into RNA
- Rabbits and Recurrence Relations
- Counting DNA Nucleotides
- Complementing a Strand of DNA
- Hidden Markov Model
- Identify Probabilistic Motif
- Identify Deterministic Motif
- Regular Expression
- Boyer-Moore Algorithm
- KDEL Visualization
- Segment Tree
- Baekjoon 16120
- Baekjoon 5052
- Trie
- Tree
- Quick Sort
- Insulin Action
- Signaling Pathway with Protein Cleavage
- Signaling Pathway with Ubiquitination
- Ras MAPK Pathway
- Phosphoinositide Signaling Pathway with RTK
- Baekjoon 2618
- Baekjoon 2565
- LIS
- Receptor Associated with Tyrosine Kinase
- RTK
- Receptor S&T Kinase
- GPCR with Ca cation
2022
- GPCR with adenylyl cyclase
- GPCR with ion channel
- GPCR
- Basic Cell Signaling
- Baekjoon 22234
- Cell Division
- Heap Sort
- Heap
- Queue
- Protein factory ; transport to peroxisome
- Protein factory ; transport to or out of nucleus
- Protein factory ; transport to mitochondria
- Linked List
- Protein factory ; sorting in Golgi
- Prefix Sum
- Baekjoon 2560
- Baekjoon 9935
- Protein factory ; transport to Golgi
- Baekjoon 2257
- Stack
- Baekjoon 1520
- Baekjoon 2011
- Basic Compiler
- Baekjoon 1010
- DFS
- Protein factory ; in ER
- Measure For Center
- Baekjoon 2156
- Baekjoon 12865
- 0-1 Knapsack problem
- Protein factory ; transport to ER
- Baekjoon 22352
- Basic Operating System
- Graph
- Baekjoon 1012
- BFS
- Basic Computer Architecture
- Baekjoon 2306
- Baekjoon 1309
- Transmembrane Transport
- Membrane Protein
- Biomembrane
- Basic Transmission Genetics
- Bacteria
- Dynamic programming
- Baekjoon 1149
- Influenza virus
- Protein
- Simple chemical foundation
- Click